ff_evaluation_suite
|
ANNOUNCE,
README,
conf-e_147.mp4sdq_tzp,
conf-e_19.expt,
conf-e_19.mmd,
conf-e_19.mol2,
conf-e_37-147.energies,
conf-e_37-147.fc,
conf-e_37-147.mmd,
conf-e_37-147.mol2,
conf-e_37.expt,
conf-e_37.gvb-lmp2,
conf-e_37.mp4sdq_tzp,
conf-e_tables.ps,
conf_e_19.titles,
hbond.energies,
hbond.interactions,
hbond_dimers.fc,
hbond_dimers.mmd,
hbond_dimers.mol2,
hbond_dimers.titles,
hbond_monomers.fc,
hbond_monomers.mmd,
hbond_monomers.mol2,
hbond_monomers.titles,
hbond_table.ps
|
|
|
Hydrogen-bonding interactions
-----------------------------
This file lists the hbond dimers and associated monomers, and gives the atoms
in the dimer associated in the one or two hydrogen-bonding interactions
X-H...Z characterized in the MMFF papers. The dimers are given in the order in
which they are listed in the papers.
Class is 1 for pure-water dimers, 2 for other neutral-neutral dimers, and 3 for
neutral-ionic dimers. Scaled QM interaction energies are given in the most
recent paper (T. A. Halgren, J. Comp. Chem., to be published) by multiplying
the computed HF/6-31G* interaction energy by 1.15 for Class 1 or by 1.10 for
Class 2; the HF/6-31G* interaction energy is used without scaling for Class 3.
Scaled QM heteroatom distances are obtained by multiplying the HF/6-31G*
X...Z distance by 0.92 for Class 1 or Class 2, or by 0.96 for Class 3.
Dimer --Monomers-- Class X1-H1..Z1 [X2-H2..Z2]
---------------------------------------------------
HB01A OH09A OH09A 1 4 5 1
HB01B OH09A OH09A 1 1 3 4 4 5 1
HB02A OH01A OH09A 2 7 8 2
HB02B OH01A OH09A 2 2 6 7
HB03A OH01A OH01A 2 8 12 2
HB30A OR06A OH09A 2 10 12 5
HB04A OH08A OH09A 2 4 9 14
HB04B OH08A OH09A 2 14 15 4
HB44A OH10A OH09A 2 3 7 8
HB44B OH10A OH09A 2 8 9 3
HB18A AR07A OH09A 2 10 12 1
HB10A CA02A CA02A 2 3 8 12 11 16 4
HB11A CA02A OH09A 2 3 8 9 9 10 3
HB47A CA08A OH09A 2 4 8 9 9 10 6
HB47B CA08B OH09A 2 9 11 4 9 11 6
HB47C CA08A OH09A 2 9 11 5 9 10 4
HB48A OR02B OH09A 2 11 13 3
HB21A CE01A OH09A 2 9 11 4
HB21B CE01A OH09A 2 9 11 2
HB22A CO01A OH09A 2 5 7 2
HB23A CO04A OH09A 2 11 13 4
HB05A AM04A OH09A 2 4 6 13
HB05B AM04A OH09A 2 13 14 3
HB06A AM01A AM01A 2 10 12 3 4 6 9
HB06B AM01A AM01A 2 10 11 3
HB35A AM04A AM04A 2 4 6 15
HB35B AM04A AM04A 2 4 6 15 16 18 3
HB36A AM02B OH09A 2 10 11 1
HB36B AM02B OH09A 2 3 6 10
HB51A AM13A OH09A 2 5 13 14
HB51B AM13A OH09A 2 14 16 5
HB07A NH10A NH10A 2 5 8 1 1 4 5
HB07B NH10A NH10A 2 5 6 1 1 3 5
HB08A NH10A OH09A 2 5 6 1
HB09A NH01A OH09A 2 8 10 2
HB12A AR09A OH09A 2 1 6 10
HB12B AR09A OH09A 2 10 11 3
HB13A AR25A OH09A 2 5 12 17
HB14A AR06A OH09A 2 2 1 11
HB17A AR02A OH09A 2 12 13 5
HB25A IM01B OH09A 2 1 5 8 8 10 3
HB26A IM03A OH09A 2 6 8 1
HB27A IM05A OH09A 2 1 6 10 10 11 4
HB43A NH13A OH09A 3 1 4 9
HB29A NH14A OH09A 2 7 13 15
HB29B NH14A OH09A 2 15 17 7
HB31A SR01A OH09A 2 1 3 4
HB32A SR03A OH09A 2 10 12 1 10 11 1
HB33A SR06A OH09A 2 11 12 1
HB19A AR08A OH09A 2 10 12 1 10 11 1
HB34A SR07A OH09A 2 14 15 4
HB37A SR01A SR01A 2 4 6 1
HB38A SR01A OH09A 2 4 5 1
HB39A CA02A NH10A 2 3 8 9 9 11 4
HB20A AR21A OH09A 2 13 15 12
HB45A NH20A OH09A 2 15 17 5 2 6 15
HB46A NH21A OH09A 2 5 14 15 15 16 2
HB24A HL01A OH09A 2 6 7 2
HB49A HL10A OH09A 2 12 13 4
HB50A OR06A NH10A 2 10 11 5
HB15A NC02A OH09A 3 2 8 9
HB28A NC06A OH09A 3 3 8 11 4 10 11
HB40A NC12A OH09A 3 1 6 11
HB41A NC08A OH09A 3 3 8 9
HB41B NC08A OH09A 3 1 5 9 3 7 9
HB42A NC13A OH09A 3 1 3 7
HB16A AN02A OH09A 3 8 9 5 8 10 4
|