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      babel-1.6
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Makefile, 
README.1ST, 
addh.c, 
addh2.c, 
aromatic.c, 
assbnd.c, 
asstypes.c, 
babel.h, 
bblmacs.h, 
bblmast.h, 
bbltyp.h, 
block.c, 
bndord.c, 
bo.c, 
buildct.c, 
combine.c, 
convert.c, 
delatms.c, 
delh2o.c, 
element.lis, 
filesrch.c, 
fileutil.c, 
gastchg.c, 
gauss.hdr, 
htoend.c, 
int2cart.c, 
intcart.c, 
menus.c, 
miniums.c, 
molwt.c, 
new.lis, 
nodummy.c, 
orient.c, 
precip.c, 
printbad.c, 
progress.c, 
psgvb.hdr, 
quanta.lis, 
rdalch.c, 
rdampout.c, 
rdbalst.c, 
rdbgf.c, 
rdboogie.c, 
rdc3d.c, 
rdcacao.c, 
rdcadpac.c, 
rdcharmm.c, 
rdcsd.c, 
rddock.c, 
rddpdb.c, 
rdelmnts.c, 
rdfdat.c, 
rdfeat.c, 
rdfract.c, 
rdg96.c, 
rdgamout.c, 
rdgauout.c, 
rdgzmat.c, 
rdhin.c, 
rdinsite.c, 
rdint.c, 
rdirc.c, 
rdisis.c, 
rdm3d.c, 
rdmacmod.c, 
rdmacmol.c, 
rdmdl.c, 
rdmicro.c, 
rdmm2.c, 
rdmm2in.c, 
rdmm3.c, 
rdmolen.c, 
rdmopac.c, 
rdmopcrt.c, 
rdpcmod.c, 
rdpdb.c, 
rdprep.c, 
rdpsgout.c, 
rdpsgvin.c, 
rdquanta.c, 
rdschak.c, 
rdshelx.c, 
rdsmiles.c, 
rdspart.c, 
rdspmm.c, 
rdspsemi.c, 
rdsybmol.c, 
rdsybyl.c, 
rdtypes.c, 
rdunichm.c, 
rdwiz.c, 
rdxed.c, 
rdxyz.c, 
renum.c, 
report.c, 
rings.c, 
ringutil.c, 
sets.c, 
smilesto.c, 
spline.c, 
strngutl.c, 
tokenst.c, 
tosmiles.c, 
tree.c, 
typbybo.c, 
types.lis, 
umslist.c, 
utils.c, 
vectors.c, 
wralch.c, 
wrbalst.c, 
wrbgf.c, 
wrbmin.c, 
wrbox.c, 
wrc3d.c, 
wrcacao.c, 
wrcache.c, 
wrcacint.c, 
wrchdrw.c, 
wrcontmp.c, 
wrcsr.c, 
wrcssr.c, 
wrdock.c, 
wrdpdb.c, 
wrfeat.c, 
wrfh.c, 
wrg96.c, 
wrgamess.c, 
wrgau.c, 
wrgaucrt.c, 
wrhin.c, 
wricon.c, 
wrint.c, 
wrisis.c, 
wrm3d.c, 
wrmaccs.c, 
wrmacmod.c, 
wrmcmol.c, 
wrmdl.c, 
wrmicro.c, 
wrmimic.c, 
wrmiv.c, 
wrmm2.c, 
wrmm3.c, 
wrmopac.c, 
wrpcmod.c, 
wrpdb.c, 
wrpsgv.c, 
wrpsgvz.c, 
wrsmiles.c, 
wrspart.c, 
wrsybmol.c, 
wrsybyl.c, 
wrtinker.c, 
wrtorlst.c, 
wrunichm.c, 
wrwiz.c, 
wrxed.c, 
wrxyz.c
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/*****
This file is part of the Babel Program
Copyright (C) 1992-96 W. Patrick Walters and Matthew T. Stahl 
All Rights Reserved 
All Rights Reserved 
All Rights Reserved 
All Rights Reserved 
For more information please contact :
babel@mercury.aichem.arizona.edu
--------------------------------------------------------------------------------
FILE : report.c
AUTHOR(S) : Pat Walters
DATE : 10-92
PURPOSE : routines to write out the statistics of a molecule (torsions, distances, angles ...)
******/
#include "bbltyp.h"
int print_report_file(FILE *file1, ums_type *mol)
{
  fprintf(file1,"FILENAME: %s\n",InfileName);
  fprintf(file1,"INTERATOMIC DISTANCES \n");
  distance_matrix(mol,file1);
  fprintf(file1,"\n\nBOND ANGLES\n");
  print_angles(mol,file1);
  fprintf(file1,"\n\nTORSION ANGLES\n");
  print_torsions(mol,file1);
  return(TRUE);
}
void get_element_type(ums_type *mol, int i, char *type)
{
  int result;
  char type_name[5];
  
  result = xlate_std_type("XYZ",Type(i),type_name);
    if (result == 0)
    {
      fprintf(stderr,"Unable to assign XYZ type to atom %d type = %s\n",
	      i,Type(i));
      strcpy(type_name,Type(i));
      toupper(type_name[0]);
      tolower(type_name[1]);
    }
  strcpy(type,type_name);
}
void distance_matrix(ums_type *mol,FILE *file1)
{
  int columns = 7;
  int max, min = 1;
  int i,j;
  char type[5];
  max = columns;
  while (max <= Atoms + columns)
  {
    fprintf(file1,"\n");
    get_element_type(mol,min,type);
    fprintf(file1,"%15s%4d",type,min);
    for (i = min + 1; ((i < max) && (i < Atoms)); i++)
      if (i <= Atoms)
      {
	get_element_type(mol,i,type);
	fprintf(file1,"%7s%4d",type,i);
      }
    fprintf(file1,"\n");
    fprintf(file1,"%14s","");
    for (i = min; i < max; i++)
      if (i <= Atoms)
	fprintf(file1,"%11s","-----------");
      
    fprintf(file1,"\n");
    for (i = min; i <= Atoms; i++)
    {
      get_element_type(mol,i,type);
      fprintf(file1,"%4s%4d ",type,i);
      for (j = min; j < max; j++)
	if (j <= i)
	  fprintf(file1,"%10.3f ",distance(Point(i),Point(j)));
      fprintf(file1,"\n");
    }
    max += columns - 1;
    min += columns - 1;
  }
  fprintf(file1,"\n");
}
void print_torsions(ums_type *mol,FILE *file1)
{
  int a,b,c,d;
  int i,j,k;
  double angle1;
  int angle_count = 0;
  torsion_rec *tr;
  tr = (torsion_rec *)malloc(Atoms * 10 * sizeof(torsion_rec));
  if (tr == NULL)
  {
    printf("Memory Allocation Error\n");
    exit(0);
  }
  
  for (i = 0; i < Bonds; i++)
  {
    b = Start(i);
    c = End(i);
    for (j = 0; j < Valence(Start(i)); j ++)
      if (Connection(Start(i),j) != End(i))
      {
	a = Connection(Start(i),j);
	for (k = 0; k < Valence(End(i)); k ++)
	  if ((Connection(End(i),k) != Start(i)) &&
	      (Connection(End(i),k) != a))
	  {
	    d = Connection(End(i),k);
	    tr[angle_count].a = a;
	    tr[angle_count].b = b;
	    tr[angle_count].c = c;
	    tr[angle_count].d = d;
	    angle_count ++;
	  }
      }
  }
  qsort(tr,angle_count,sizeof(torsion_rec),QSORT_PROTO compare_torsion);
  for (i = 0; i < angle_count; i++)
  {
    angle1 = torsion(Point(tr[i].a),Point(tr[i].b),Point(tr[i].c),Point(tr[i].d));
    fprintf(file1,"%4d %4d %4d %4d %10.3f\n",tr[i].a,tr[i].b,tr[i].c,tr[i].d,angle1);
  }
  
  free(tr); 
}	
  
void print_angles(ums_type *mol,FILE *file1)
{
  int a,b,c,d;
  int i,j,k;
  double angle1;
  int angle_count = 0;
  angle_rec *tr;
  angle_rec last;
  tr = (angle_rec *)malloc(Atoms * 10 * sizeof(angle_rec));
  if (tr == NULL)
  {
    printf("Memory Allocation Error\n");
    exit(0);
  }
  last.a = -1;
  last.b = -1;
  last.c = -1;
  
  for (i = 0; i < Bonds; i++)
  {
    b = Start(i);
    c = End(i);
    for (j = 0; j < Valence(Start(i)); j ++)
      if (Connection(Start(i),j) != End(i))
      {
	a = Connection(Start(i),j);
	for (k = 0; k < Valence(End(i)); k ++)
	  if (Connection(End(i),k) != Start(i))
	  {
	    d = Connection(End(i),k);
	    tr[angle_count].a = a;
	    tr[angle_count].b = b;
	    tr[angle_count].c = c;
	    sort_values(&tr[angle_count].a,&tr[angle_count].c);
	    angle_count ++;
	    tr[angle_count].a = b;
	    tr[angle_count].b = c;
	    tr[angle_count].c = d;
	    sort_values(&tr[angle_count].a,&tr[angle_count].c);
	    angle_count ++;
	  }
      }
  }
  qsort(tr,angle_count,sizeof(angle_rec),QSORT_PROTO compare_angle); 
  for (i = 0; i < angle_count; i++)
  {
    if ((tr[i].a != last.a) || (tr[i].b != last.b) || (tr[i].c != last.c)) 
    {
      angle1 = bond_angle(Point(tr[i].a),Point(tr[i].b),Point(tr[i].c));
      fprintf(file1,"%4d %4d %4d %4s %4s %4s %10.3f \n",
	      tr[i].a,tr[i].b,tr[i].c,
	      Type(tr[i].a),Type(tr[i].b),Type(tr[i].c),angle1);
      last.a = tr[i].a;
      last.b = tr[i].b;
      last.c = tr[i].c;
    }
  }
  free(tr);
}
void sort_values(int *a, int *b)
{
  int temp;
  
  if (*a > *b)
  {
    temp = *a;
    *a = *b;
    *b = temp;
  }
}
  
int compare_torsion(torsion_rec *t1, torsion_rec *t2)
{
  if (t1->a > t2->a)
    return(1);
  else
    if (t1->a < t2->a)
      return(-1);
    else
      if (t1->b > t2->b)
	return(1);
      else
	if (t1->b < t2->b)
	  return(-1);
	else
	  if (t1->c > t2->c)
	    return(1);
	  else
	    if (t1->c < t2->c)
	      return(-1);
	    else
	      if (t1->d > t2->d)
		return(1);
	      else
		if (t1->d < t2->d)
		  return(-1);
		else
		  return(0);
}
int compare_angle(angle_rec *t1, angle_rec *t2)
{
  if (t1->a > t2->a)
    return(1);
  else
    if (t1->a < t2->a)
      return(-1);
    else
      if (t1->b > t2->b)
	return(1);
      else
	if (t1->b < t2->b)
	  return(-1);
	else
	  if (t1->c > t2->c)
	    return(1);
	  else
	    if (t1->c < t2->c)
	      return(-1);
		else
		  return(0);
}
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