babel
|
README.BABEL,
README.WIN,
babel-1.05.tar.Z,
babel-1.06f.tar.Z,
babel-1.1.tar.Z,
babel-1.6,
babel-1.6-Irix-6.tar.Z,
babel-1.6.tar.Z,
babel-v35030.tar.Z,
babel106.zip,
babel11a.zip,
babel11e.zip,
babel16.zip,
babelw16.zip,
babelwin.zip,
babelwin.zip.old,
macbabel-1.03-no-fpu.sea.hqx,
macbabel-1.03.sea.hqx,
readme.babel,
sgi-babel-1.06f.tar.Z,
sgi-babel-1.1,
sgi-babel-1.1.tar.Z,
sourc106.zip,
sun-babel-1.06.tar.Z,
sun-babel-1.1.tar.Z
|
|
|
BABEL is a program designed to interconvert a number of file formats
currently used in molecular moldeling. The program is available for
Unix (AIX, Ultrix, Sun-OS, Convex, SGI, Cray, Linux), MS-DOS, and on
Macs running at least System 7.0.
Babel will read the following file types :
Alchemy AMBER PREP Ball and Stick
Biosym .CAR Boogie Cacao Cartesian
Cambridge CADPAC* CHARMm* Chem3D Cartesian 1
Chem3D Cartesian 2 CSD CSSR CSD FDAT*
CSD GSTAT Free Form Fractional GAMESS Output*
Gaussian Z-Matrix Gaussian Output* Hyperchem HIN*
Mac Molecule Macromodel Micro World
MM2 Input MM2 Ouput MM3*
MMADS* MDL MOLfile* MOLIN*
Mopac Cartesian Mopac Internal Mopac Output
PDB ShelX Sybyl Mol*
Sybyl Mol2* XYZ
Babel will write the following file types :
Alchemy Ball and Stick Cacao Cartesian
CAChe MolStruct* Chem3D Cartesian 1 Chem3D Cartesian 2
ChemDraw Conn. Table* CSD CSSR* Gamess Input*
Gaussian Cartesian* Gaussian Z-matrix Hyperchem HIN*
IDATM Mac Molecule Macromodel
Micro World MM2 Input* MM2 Ouput
MM3* MMADS* MDL Molfile*
Mopac Cartesian Mopac Internal PDB
Report Sybyl Mol* Sybyl Mol2*
XYZ
Babel is capable of assigning hybridization, bond order, and connectivity
when these elements are not present in the input file.
NOTE: The file formats indicated with * are not currently supported in the
Mac version. We're currently working on a Mac update which will include all
these formats, and few other new goodies. This update should be ready in a
couple of weeks.
INSTALLATION OVERVIEW
Babel is avialiable via annonymous ftp from
joplin.biosci.arizona.edu in pub/Babel
UNIX
The Unix version is in the file babel-1.04.tar.Z
1. uncompress babel-1.04.tar.Z
2. tar -xvf babel-1.04.tar
3. follow the instructions in README.1ST
-------Special note for users with Sun workstations-------------------
Many older Sun C compilers are not ANSI compliant and will not compile
Babel. However, there are two options :
1. Use gcc
2. Download the file sun-babel.tar.Z which has a binary compiled with
with gcc on a sun 4 under SunOS release 4.1.3.
-------Specail note for users with SGI workstations-----------------------
It seems that some people who have SGI workstations don't have a C compiler.
For these people we have put an SGI binary in the file sgi-babel.tar.Z
MAC
The Mac version is in the file macbabel.sea.hqx
1. Use you favorite archiving program to unbinhex the archive.
2. Double click on the self extracting archive macbabel.sea
3. Follow the instructions in the file Babel Manual
DOS
The DOS version is in the file babel104.zip
1. pkunzip babel106.zip
2. follow the instructions in README.1ST
Any questions regarding BABEL should be directed to
babel@mercury.aichem.arizona.edu
|