babel-1.6
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Makefile,
README.1ST,
addh.c,
addh2.c,
aromatic.c,
assbnd.c,
asstypes.c,
babel.h,
bblmacs.h,
bblmast.h,
bbltyp.h,
block.c,
bndord.c,
bo.c,
buildct.c,
combine.c,
convert.c,
delatms.c,
delh2o.c,
element.lis,
filesrch.c,
fileutil.c,
gastchg.c,
gauss.hdr,
htoend.c,
int2cart.c,
intcart.c,
menus.c,
miniums.c,
molwt.c,
new.lis,
nodummy.c,
orient.c,
precip.c,
printbad.c,
progress.c,
psgvb.hdr,
quanta.lis,
rdalch.c,
rdampout.c,
rdbalst.c,
rdbgf.c,
rdboogie.c,
rdc3d.c,
rdcacao.c,
rdcadpac.c,
rdcharmm.c,
rdcsd.c,
rddock.c,
rddpdb.c,
rdelmnts.c,
rdfdat.c,
rdfeat.c,
rdfract.c,
rdg96.c,
rdgamout.c,
rdgauout.c,
rdgzmat.c,
rdhin.c,
rdinsite.c,
rdint.c,
rdirc.c,
rdisis.c,
rdm3d.c,
rdmacmod.c,
rdmacmol.c,
rdmdl.c,
rdmicro.c,
rdmm2.c,
rdmm2in.c,
rdmm3.c,
rdmolen.c,
rdmopac.c,
rdmopcrt.c,
rdpcmod.c,
rdpdb.c,
rdprep.c,
rdpsgout.c,
rdpsgvin.c,
rdquanta.c,
rdschak.c,
rdshelx.c,
rdsmiles.c,
rdspart.c,
rdspmm.c,
rdspsemi.c,
rdsybmol.c,
rdsybyl.c,
rdtypes.c,
rdunichm.c,
rdwiz.c,
rdxed.c,
rdxyz.c,
renum.c,
report.c,
rings.c,
ringutil.c,
sets.c,
smilesto.c,
spline.c,
strngutl.c,
tokenst.c,
tosmiles.c,
tree.c,
typbybo.c,
types.lis,
umslist.c,
utils.c,
vectors.c,
wralch.c,
wrbalst.c,
wrbgf.c,
wrbmin.c,
wrbox.c,
wrc3d.c,
wrcacao.c,
wrcache.c,
wrcacint.c,
wrchdrw.c,
wrcontmp.c,
wrcsr.c,
wrcssr.c,
wrdock.c,
wrdpdb.c,
wrfeat.c,
wrfh.c,
wrg96.c,
wrgamess.c,
wrgau.c,
wrgaucrt.c,
wrhin.c,
wricon.c,
wrint.c,
wrisis.c,
wrm3d.c,
wrmaccs.c,
wrmacmod.c,
wrmcmol.c,
wrmdl.c,
wrmicro.c,
wrmimic.c,
wrmiv.c,
wrmm2.c,
wrmm3.c,
wrmopac.c,
wrpcmod.c,
wrpdb.c,
wrpsgv.c,
wrpsgvz.c,
wrsmiles.c,
wrspart.c,
wrsybmol.c,
wrsybyl.c,
wrtinker.c,
wrtorlst.c,
wrunichm.c,
wrwiz.c,
wrxed.c,
wrxyz.c
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/*****
This file is part of the Babel Program
Copyright (C) 1992-96 W. Patrick Walters and Matthew T. Stahl
All Rights Reserved
All Rights Reserved
All Rights Reserved
All Rights Reserved
For more information please contact :
babel@mercury.aichem.arizona.edu
--------------------------------------------------------------------------------
FILE : rdampout.c
AUTHOR(S) : Pat Walters
DATE : 1-93
PURPOSE : Routines to read a Semichem AMPAC output file
******/
#include "bbltyp.h"
int
read_ampac_output(FILE *file1, ums_type *mol)
{
char mop_line[BUFF_SIZE];
int i = 0;
int j;
int result;
long int pos = 0;
long int chg_pos = 0;
double theEnergy;
int has_charges = FALSE;
int count = 0;
char trigger1[300], trigger2[300];
int foundEnergy = FALSE;
while (fgets(mop_line,sizeof(mop_line),file1))
{
if (strstr(mop_line,"FINAL") && strstr(mop_line,"HEAT"))
{
sscanf(mop_line,"%*s%*s%*s%*s%*s%lf",&theEnergy);
foundEnergy = TRUE;
}
if (strstr(mop_line,"NET ATOMIC CHARGES"))
{
has_charges = TRUE;
chg_pos = ftell(file1);
}
if (strstr(mop_line,"CARTESIAN COORDINATES") && foundEnergy)
break;
}
for (i = 0;i < 1;i++)
fgets(mop_line,sizeof(mop_line),file1);
pos = ftell(file1);
while (fgets(mop_line,sizeof(mop_line), file1))
{
j = sscanf(mop_line,"%s %s",trigger1,trigger2);
if ((count_tokens(mop_line," ") == 5) && isdigit(trigger1[0]) &&
isalpha(trigger2[0]))
count++;
else
break;
}
fseek(file1,pos,0);
Atoms = count;
ShowProgress(Atoms,"Reading Atoms");
initialize_ums(&mol);
Energy = theEnergy;
for (i = 1; i <= Atoms; i++)
{
UpdateProgress();
fgets(mop_line,sizeof(mop_line), file1);
j = sscanf(mop_line,"%*d %s %lf %lf %lf",Type(i),&X(i),&Y(i),&Z(i));
if (j != 4)
{
show_warning("Input file error");
release_ums(mol);
Atoms = 0;
return(FALSE);
}
}
pos = ftell(file1);
if (has_charges)
{
fseek(file1,chg_pos,0);
toss(file1,3);
for (i = 1; i <= Atoms; i++)
{
fgets(mop_line,sizeof(mop_line), file1);
sscanf(mop_line,"%*s%*s%lf",&Charge(i));
}
}
if (Atoms > 0)
{
result = assign_radii(mol);
result = assign_bonds(mol);
result = assign_types(mol);
result = build_connection_table(mol);
assign_bond_order(mol);
}
fseek(file1,pos,0);
while (fgets(mop_line,sizeof(mop_line), file1))
{
pos = ftell(file1);
if (strstr(mop_line,"FINAL") && strstr(mop_line,"HEAT"))
{
fseek(file1,pos,0);
break;
}
}
return(TRUE);
}
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