babel-1.6
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Makefile,
README.1ST,
addh.c,
addh2.c,
aromatic.c,
assbnd.c,
asstypes.c,
babel.h,
bblmacs.h,
bblmast.h,
bbltyp.h,
block.c,
bndord.c,
bo.c,
buildct.c,
combine.c,
convert.c,
delatms.c,
delh2o.c,
element.lis,
filesrch.c,
fileutil.c,
gastchg.c,
gauss.hdr,
htoend.c,
int2cart.c,
intcart.c,
menus.c,
miniums.c,
molwt.c,
new.lis,
nodummy.c,
orient.c,
precip.c,
printbad.c,
progress.c,
psgvb.hdr,
quanta.lis,
rdalch.c,
rdampout.c,
rdbalst.c,
rdbgf.c,
rdboogie.c,
rdc3d.c,
rdcacao.c,
rdcadpac.c,
rdcharmm.c,
rdcsd.c,
rddock.c,
rddpdb.c,
rdelmnts.c,
rdfdat.c,
rdfeat.c,
rdfract.c,
rdg96.c,
rdgamout.c,
rdgauout.c,
rdgzmat.c,
rdhin.c,
rdinsite.c,
rdint.c,
rdirc.c,
rdisis.c,
rdm3d.c,
rdmacmod.c,
rdmacmol.c,
rdmdl.c,
rdmicro.c,
rdmm2.c,
rdmm2in.c,
rdmm3.c,
rdmolen.c,
rdmopac.c,
rdmopcrt.c,
rdpcmod.c,
rdpdb.c,
rdprep.c,
rdpsgout.c,
rdpsgvin.c,
rdquanta.c,
rdschak.c,
rdshelx.c,
rdsmiles.c,
rdspart.c,
rdspmm.c,
rdspsemi.c,
rdsybmol.c,
rdsybyl.c,
rdtypes.c,
rdunichm.c,
rdwiz.c,
rdxed.c,
rdxyz.c,
renum.c,
report.c,
rings.c,
ringutil.c,
sets.c,
smilesto.c,
spline.c,
strngutl.c,
tokenst.c,
tosmiles.c,
tree.c,
typbybo.c,
types.lis,
umslist.c,
utils.c,
vectors.c,
wralch.c,
wrbalst.c,
wrbgf.c,
wrbmin.c,
wrbox.c,
wrc3d.c,
wrcacao.c,
wrcache.c,
wrcacint.c,
wrchdrw.c,
wrcontmp.c,
wrcsr.c,
wrcssr.c,
wrdock.c,
wrdpdb.c,
wrfeat.c,
wrfh.c,
wrg96.c,
wrgamess.c,
wrgau.c,
wrgaucrt.c,
wrhin.c,
wricon.c,
wrint.c,
wrisis.c,
wrm3d.c,
wrmaccs.c,
wrmacmod.c,
wrmcmol.c,
wrmdl.c,
wrmicro.c,
wrmimic.c,
wrmiv.c,
wrmm2.c,
wrmm3.c,
wrmopac.c,
wrpcmod.c,
wrpdb.c,
wrpsgv.c,
wrpsgvz.c,
wrsmiles.c,
wrspart.c,
wrsybmol.c,
wrsybyl.c,
wrtinker.c,
wrtorlst.c,
wrunichm.c,
wrwiz.c,
wrxed.c,
wrxyz.c
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/*****
This file is part of the Babel Program
Copyright (C) 1992-96 W. Patrick Walters and Matthew T. Stahl
All Rights Reserved
All Rights Reserved
All Rights Reserved
All Rights Reserved
For more information please contact :
babel@mercury.aichem.arizona.edu
-----------------------------------------------------------------------------
*/
#include "bbltyp.h"
int do_spline(ums_type *mol)
{
FILE *file1, *outfile;
int end = FALSE, result = 0;
int i;
int in_count = 0;
int out_count = 1;
ums_type *mol2,*tmp;
vect_type **vect;
mol2 = (ums_type *)malloc(sizeof(ums_type));
if (!mol2)
fatal_error("Unable to allocate memory for ums");
mol2->control = mol->control;
file1 = open_read(InfileName);
vect = NULL;
while (!end)
{
if (in_count == 0)
{
result = ReaderFunction(file1,mol);
result = ReaderFunction(file1,mol2);
in_count = 2;
vect = (vect_type **)malloc(sizeof(vect_type *) * (Atoms+1));
for (i = 1;i <= Atoms;i++)
vect[i] = (vect_type *)malloc(sizeof(vect_type));
}
else
{
tmp = mol;
mol = mol2;
mol2 = tmp;
release_ums(mol2);
result = ReaderFunction(file1,mol2);
in_count++;
}
get_vectors(mol,mol2,vect,Increment);
for (i = 0;i < Increment;i++)
{
generate_outfile_name(mol,out_count);
outfile = open_write(OutfileName);
do_outputs(outfile,mol);
fclose(outfile);
out_count++;
add_step(mol,vect);
}
if (check_for_eof(file1))
end = TRUE;
}
return(FALSE);
}
void
get_vectors(ums_type *start,ums_type *end,vect_type *vect[],int increment)
{
int i;
if (increment == 0)
increment = 1;
for (i = 1;i <= start->num_atoms;i++)
{
(*vect[i]).x = start->atoms[i].point.x - end->atoms[i].point.x;
(*vect[i]).y = start->atoms[i].point.y - end->atoms[i].point.y;
(*vect[i]).z = start->atoms[i].point.z - end->atoms[i].point.z;
}
for (i = 1;i <= start->num_atoms;i++)
{
(*vect[i]).x = (*vect[i]).x/(double) increment;
(*vect[i]).y = (*vect[i]).y/(double) increment;
(*vect[i]).z = (*vect[i]).z/(double) increment;
}
}
void
add_step(ums_type *mol,vect_type *vect[])
{
int i;
for (i = 1;i <= Atoms;i++)
{
X(i) += -(*vect[i]).x;
Y(i) += -(*vect[i]).y;
Z(i) += -(*vect[i]).z;
}
}
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