babel-1.6
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Makefile,
README.1ST,
addh.c,
addh2.c,
aromatic.c,
assbnd.c,
asstypes.c,
babel.h,
bblmacs.h,
bblmast.h,
bbltyp.h,
block.c,
bndord.c,
bo.c,
buildct.c,
combine.c,
convert.c,
delatms.c,
delh2o.c,
element.lis,
filesrch.c,
fileutil.c,
gastchg.c,
gauss.hdr,
htoend.c,
int2cart.c,
intcart.c,
menus.c,
miniums.c,
molwt.c,
new.lis,
nodummy.c,
orient.c,
precip.c,
printbad.c,
progress.c,
psgvb.hdr,
quanta.lis,
rdalch.c,
rdampout.c,
rdbalst.c,
rdbgf.c,
rdboogie.c,
rdc3d.c,
rdcacao.c,
rdcadpac.c,
rdcharmm.c,
rdcsd.c,
rddock.c,
rddpdb.c,
rdelmnts.c,
rdfdat.c,
rdfeat.c,
rdfract.c,
rdg96.c,
rdgamout.c,
rdgauout.c,
rdgzmat.c,
rdhin.c,
rdinsite.c,
rdint.c,
rdirc.c,
rdisis.c,
rdm3d.c,
rdmacmod.c,
rdmacmol.c,
rdmdl.c,
rdmicro.c,
rdmm2.c,
rdmm2in.c,
rdmm3.c,
rdmolen.c,
rdmopac.c,
rdmopcrt.c,
rdpcmod.c,
rdpdb.c,
rdprep.c,
rdpsgout.c,
rdpsgvin.c,
rdquanta.c,
rdschak.c,
rdshelx.c,
rdsmiles.c,
rdspart.c,
rdspmm.c,
rdspsemi.c,
rdsybmol.c,
rdsybyl.c,
rdtypes.c,
rdunichm.c,
rdwiz.c,
rdxed.c,
rdxyz.c,
renum.c,
report.c,
rings.c,
ringutil.c,
sets.c,
smilesto.c,
spline.c,
strngutl.c,
tokenst.c,
tosmiles.c,
tree.c,
typbybo.c,
types.lis,
umslist.c,
utils.c,
vectors.c,
wralch.c,
wrbalst.c,
wrbgf.c,
wrbmin.c,
wrbox.c,
wrc3d.c,
wrcacao.c,
wrcache.c,
wrcacint.c,
wrchdrw.c,
wrcontmp.c,
wrcsr.c,
wrcssr.c,
wrdock.c,
wrdpdb.c,
wrfeat.c,
wrfh.c,
wrg96.c,
wrgamess.c,
wrgau.c,
wrgaucrt.c,
wrhin.c,
wricon.c,
wrint.c,
wrisis.c,
wrm3d.c,
wrmaccs.c,
wrmacmod.c,
wrmcmol.c,
wrmdl.c,
wrmicro.c,
wrmimic.c,
wrmiv.c,
wrmm2.c,
wrmm3.c,
wrmopac.c,
wrpcmod.c,
wrpdb.c,
wrpsgv.c,
wrpsgvz.c,
wrsmiles.c,
wrspart.c,
wrsybmol.c,
wrsybyl.c,
wrtinker.c,
wrtorlst.c,
wrunichm.c,
wrwiz.c,
wrxed.c,
wrxyz.c
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/*****
This file is part of the Babel Program
Copyright (C) 1992-96 W. Patrick Walters and Matthew T. Stahl
All Rights Reserved
All Rights Reserved
All Rights Reserved
All Rights Reserved
For more information please contact :
babel@mercury.aichem.arizona.edu
-----------------------------------------------------------------------------
FILE : rdhin.c
AUTHOR(S) : Pat Walters
DATE : 1-94
PURPOSE : routines to read a Hyperchem .HIN file
******/
#include "bbltyp.h"
#define DELIMS "\t\n "
int
read_hin(FILE *file1, ums_type *mol)
{
char the_line[300];
int tokens;
int i,j,k;
int max;
char temp[20];
long pos = 0;
int counter = 0;
while (strstr(the_line,"mol") == NULL)
fgets(the_line,sizeof(the_line),file1);
Atoms = 0;
if (strstr(the_line,"mol ") != NULL)
{
counter++;
pos = ftell(file1);
Atoms = 0;
while (strstr(the_line,"endmol") == NULL)
{
fgets(the_line,sizeof(the_line),file1);
if (strstr(the_line,"atom"))
{
Atoms++;
}
}
}
ShowProgress(Atoms,"Reading Atoms");
initialize_ums(&mol);
fseek(file1,pos,0);
i = 1;
strcpy(the_line,"");
while (strstr(the_line,"endmol") == NULL)
{
fgets(the_line,sizeof(the_line),file1);
if (strstr(the_line,"atom"))
{
UpdateProgress();
tokens = count_tokens(the_line,DELIMS);
get_token(Type(i),the_line,DELIMS,4);
clean_atom_type(Type(i));
get_token(temp,the_line,DELIMS,8);
X(i) = atof(temp);
get_token(temp,the_line,DELIMS,9);
Y(i) = atof(temp);
get_token(temp,the_line,DELIMS,10);
Z(i) = atof(temp);
get_token(temp,the_line,DELIMS,11);
Valence(i) = (int) atof(temp);
k = 0;
max = 12 + 2 * Valence(i);
for (j = 12; j < max; j+=2)
{
get_token(temp,the_line,DELIMS,j);
Connection(i,k) = atoi(temp);
get_token(temp,the_line,DELIMS,j+1);
BO(i,k) = translate_hin_bond_order(temp[0]);
k++;
}
i++;
}
}
assign_types(mol);
build_connection_table(mol);
return(TRUE);
}
int translate_hin_bond_order(char c)
{
int bo;
switch(c)
{
case 's':
bo = 1;
break;
case 'd':
bo = 2;
break;
case 't':
bo = 3;
break;
case 'a':
bo = 5;
break;
default :
printf("Can't translate .hin bond order %c\n",c);
}
return(bo);
}
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